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Publication

Is a rare CXCL8 gene variant a new possible cause or course factor of inflammatory bowel disease?

2025, Gabryel, Marcin, Zakerska-Banaszak, Oliwia, Ladziak, Karolina, Hubert, Katarzyna Anna, Baturo, Alina, Suszyńska-Zajczyk, Joanna, Hryhorowicz, Magdalena Julita, Dobrowolska, Agnieszka, Skrzypczak-Zielinska, Marzena

IntroductionThe pathogenesis of inflammatory bowel diseases (IBD) involves genetic, environmental, immunological, and microbial factors; however, it remains unclear. Pro-inflammatory interleukin 8 (IL-8), encoded by the CXCL8 gene, assumes a crucial chemotactic role in leukocyte migration.MethodsThis study aimed to investigate whether an association exists between IBD and two CXCL8 variants, namely, c.-251A>T (rs4073) and c.91G>T (rs188378669), and IL-8 concentration. We analyzed the distribution of both variants among 353 Polish IBD patients and 200 population subjects using pyrosequencing, competitive allele-specific PCR and Sanger sequencing.ResultsThe c.91T stop-gained allele was significantly more frequent in IBD patients (2.12%) than in controls (0.25%) (p = 0.0121), while the c.-251T allele frequencies were similar (54% vs. 51.5%, p = 0.4955). Serum IL-8 concentrations, measured using ELISA, were higher in IBD patients with the c.91 GG genotype compared to healthy controls (mean, 70.02 vs. 51.5 pg/ml, p<0.01) and patients with c.91 GT (mean, 61.73 pg/ml). Moreover, clinical data indicated that carriers of the c.91T variant need more often corticosteroids and surgical treatment of the disease than GG homozygous IBD patients.ConclusionThis suggest that the CXCL8 c.91T allele may influence IBD manifestation and the course of the disorders in Polish patients, potentially serving as a novel target for future studies and therapeutic approaches.

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Publication

Evolution of CRISPR/Cas Systems for Precise Genome Editing

2023, Hryhorowicz, Magdalena Julita, Lipiński, Daniel, Zeyland, Joanna

The bacteria-derived CRISPR/Cas (an acronym for regularly interspaced short palindromic repeats/CRISPR-associated protein) system is currently the most widely used, versatile, and convenient tool for genome engineering. CRISPR/Cas-based technologies have been applied to disease modeling, gene therapies, transcriptional modulation, and diagnostics. Nevertheless, some challenges remain, such as the risk of immunological reactions or off-target effects. To overcome these problems, many new methods and CRISPR/Cas-based tools have been developed. In this review, we describe the current classification of CRISPR systems and new precise genome-editing technologies, summarize the latest applications of this technique in several fields of research, and, finally, discuss CRISPR/Cas system limitations, ethical issues, and challenges.

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Research Project

Nanocząstki magnetyczne jako potencjalne narzędzie do zwiększenia wydajności transfekcji sgRNA oraz Cas9 mRNA w warunkach in vitro mierzonej efektywnością modyfikacji wybranych miejsc w genomie Sus scrofa domestica