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The Response of the Mycobiome to the Biofumigation of Replanted Soil in a Fruit Tree Nursery

cris.virtual.author-orcid#PLACEHOLDER_PARENT_METADATA_VALUE#
cris.virtual.author-orcid0000-0002-1147-2973
cris.virtual.author-orcid0000-0003-0421-6071
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cris.virtual.author-orcid0000-0002-0102-0084
cris.virtual.author-orcid0000-0002-4237-6407
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cris.virtualsource.author-orcidc08fd574-d16e-4443-9d2d-56dc7f1f7615
cris.virtualsource.author-orcid9462fa94-74eb-4b70-864b-63d84802f9f0
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cris.virtualsource.author-orcid51a5a68b-106b-4e9d-bd9b-79d15d3ec0c1
cris.virtualsource.author-orcidbed1e4f8-04b9-4a1e-939f-aa94095604ec
dc.abstract.enIn a long-term monoculture with fruit trees and tree nurseries, it is necessary to regenerate the soil due to the risk of apple replant disease (ARD). The occurrence of ARD is manifested in the structure of the mycobiome. The assumption of our experiment was that the use of oil radish (Raphanus sativus var. oleifera), white mustard (Sinapis alba), and marigold (Tagetes patula L.) as phytosanitary plants for biofumigation would provide crops with nutrients, improve soil physicochemical properties, and influence the diversity of microbiota, including fungal networks, towards a beneficial mycobiome. Metagenomic analysis of fungal populations based on the hypervariable ITS1 region was used for assessing changes in the soil mycobiome. It showed that biofumigation, mainly with a forecrop of marigold (Tagetes patula L.) (R3), caused an improvement in soil physicochemical properties (bulk density and humus) and the highest increase in the abundance of operational taxonomic units (OTUs) of the Fungi kingdom, which was similar to that of agriculturally undegraded soils, and amounted to 54.37%. In this variant of the experiment, the most OTUs were identified at the phylum level, for Ascomycota (39.82%) and Mortierellomycota beneficial fungi (7.73%). There were no such dependencies in the soils replanted with forecrops of oilseed radish (Raphanus sativus var. oleifera) and white mustard (Sinapis alba). Biofumigation with marigold and oil radish contributed to a reduction in the genus Fusarium, which contains several significant plant-pathogenic species. The percentages of operational taxonomic units (OTUs) of Fusarium spp. decreased from 1.57% to 0.17% and 0.47%, respectively.
dc.affiliationWydział Rolnictwa, Ogrodnictwa i Biotechnologii
dc.affiliation.instituteKatedra Roślin Ozdobnych, Dendrologii i Sadownictwa
dc.affiliation.instituteKatedra Gleboznawstwa i Mikrobiologii
dc.affiliation.instituteKatedra Metod Matematycznych i Statystycznych
dc.contributor.authorWieczorek, Robert
dc.contributor.authorZydlik, Zofia
dc.contributor.authorWolna-Maruwka, Agnieszka
dc.contributor.authorKubiak, Adrianna
dc.contributor.authorBocianowski, Jan
dc.contributor.authorNiewiadomska, Alicja
dc.date.access2024-09-23
dc.date.accessioned2024-10-09T08:16:47Z
dc.date.available2024-10-09T08:16:47Z
dc.date.copyright2024-08-29
dc.date.issued2024
dc.description.abstract<jats:p>In a long-term monoculture with fruit trees and tree nurseries, it is necessary to regenerate the soil due to the risk of apple replant disease (ARD). The occurrence of ARD is manifested in the structure of the mycobiome. The assumption of our experiment was that the use of oil radish (Raphanus sativus var. oleifera), white mustard (Sinapis alba), and marigold (Tagetes patula L.) as phytosanitary plants for biofumigation would provide crops with nutrients, improve soil physicochemical properties, and influence the diversity of microbiota, including fungal networks, towards a beneficial mycobiome. Metagenomic analysis of fungal populations based on the hypervariable ITS1 region was used for assessing changes in the soil mycobiome. It showed that biofumigation, mainly with a forecrop of marigold (Tagetes patula L.) (R3), caused an improvement in soil physicochemical properties (bulk density and humus) and the highest increase in the abundance of operational taxonomic units (OTUs) of the Fungi kingdom, which was similar to that of agriculturally undegraded soils, and amounted to 54.37%. In this variant of the experiment, the most OTUs were identified at the phylum level, for Ascomycota (39.82%) and Mortierellomycota beneficial fungi (7.73%). There were no such dependencies in the soils replanted with forecrops of oilseed radish (Raphanus sativus var. oleifera) and white mustard (Sinapis alba). Biofumigation with marigold and oil radish contributed to a reduction in the genus Fusarium, which contains several significant plant-pathogenic species. The percentages of operational taxonomic units (OTUs) of Fusarium spp. decreased from 1.57% to 0.17% and 0.47%, respectively.</jats:p>
dc.description.accesstimeat_publication
dc.description.bibliographyil., bibliogr.
dc.description.financepublication_nocost
dc.description.financecost0,00
dc.description.if3,3
dc.description.number9
dc.description.points100
dc.description.reviewreview
dc.description.versionfinal_published
dc.description.volume14
dc.identifier.doi10.3390/agronomy14091961
dc.identifier.issn2073-4395
dc.identifier.urihttps://sciencerep.up.poznan.pl/handle/item/1796
dc.identifier.weblinkhttps://www.mdpi.com/2073-4395/14/9/1961
dc.languageen
dc.relation.ispartofAgronomy
dc.relation.pagesart. 1961
dc.rightsCC-BY
dc.sciencecloudsend
dc.share.typeOPEN_JOURNAL
dc.subject.enbiodiversity
dc.subject.enfungal networks
dc.subject.enMortierellomycota
dc.subject.enEurotiales
dc.subject.enphysicochemical properties of soil
dc.titleThe Response of the Mycobiome to the Biofumigation of Replanted Soil in a Fruit Tree Nursery
dc.typeJournalArticle
dspace.entity.typePublication
oaire.citation.issue9
oaire.citation.volume14