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Effects of hygiene methods on the microbiome and resistome of poultry litter

cris.virtual.author-orcid0000-0002-2572-0202
cris.virtual.author-orcid0000-0002-9204-5534
cris.virtual.author-orcid0000-0003-1772-7997
cris.virtual.author-orcid0000-0003-3179-503X
cris.virtual.author-orcid0000-0003-3638-4192
cris.virtual.author-orcid0000-0003-3489-1684
cris.virtual.author-orcid0000-0001-9649-2422
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cris.virtualsource.author-orcid4fbd1f59-0dc5-4c7a-8b19-33126b5d8e0c
cris.virtualsource.author-orcid9107a3d6-a60a-4353-ad9c-465de2211a83
cris.virtualsource.author-orcid95e7bfbc-b48c-4cbc-a67b-0c82494d303d
cris.virtualsource.author-orcidd40011ba-3c92-4474-97ec-4aab0d17d286
cris.virtualsource.author-orcidfdc8d278-f25b-44af-b3f6-2d27e735c9d8
cris.virtualsource.author-orcid4ed4e453-28dc-48e8-864d-49bd28fdc14e
cris.virtualsource.author-orcid99373fd8-8308-496e-b7d9-218069d2ee83
cris.virtualsource.author-orcid#PLACEHOLDER_PARENT_METADATA_VALUE#
dc.abstract.enThe inappropriate use of antibiotics in poultry farming and the presence of antibiotic residues in the environment significantly impact the development of resistance among microorganisms present in the production ecosystem. The environment of the henhouse, including chicken manure, creates excellent conditions for the spread of antibiotic-resistant bacteria (ARBs). The presence of ARBs in the litter often leads to the transfer of antibiotic resistance genes (ARGs) through horizontal gene transfer (HGT). Considering the risks associated with the agricultural use of manure, all sanitation treatments applied to poultry litter before its agricultural use should effectively eliminate physicochemical (antibiotic residues, heavy metals) and microbiological (ARBs, ARGs) hazards. This review aims to analyse the current practices in rational manure management, aligned with bio-economy principles, and evaluate their effectiveness in reducing the spread of antibiotic resistance and pathogens in the poultry production ecosystem. This review considered biological, chemical and physical processes for poultry litter treatment applicable in livestock settings, including the use of biopreparations, humic substances, and aluminosilicates during chicken rearing. Post-rearing methods such as the application of organic additives, minerals (calcium compounds), and silver-based nano preparations are also discussed, along with biological and physical methods such as storage, anaerobic digestion, composting and pasteurisation.
dc.affiliationWydział Medycyny Weterynaryjnej i Nauk o Zwierzętach
dc.affiliation.instituteKatedra Hodowli Zwierząt i Oceny Surowców
dc.affiliation.instituteKatedra Żywienia Zwierząt
dc.affiliation.instituteKatedra Genetyki i Podstaw Hodowli Zwierząt​​
dc.contributor.authorRacewicz, Przemysław Łukasz
dc.contributor.authorNowaczewski, Sebastian
dc.contributor.authorHejdysz, Marcin
dc.contributor.authorŚlósarz, Piotr Paweł
dc.contributor.authorKaczmarek, Sebastian
dc.contributor.authorPawlak, Piotr
dc.contributor.authorMadeja, Zofia Eliza
dc.contributor.authorSzyndler-Nędza, Magdalena
dc.date.access2026-02-26
dc.date.accessioned2026-02-27T06:43:09Z
dc.date.available2026-02-27T06:43:09Z
dc.date.copyright2026-02-13
dc.date.issued2026
dc.description.abstract<jats:title>Abstract</jats:title> <jats:p>The inappropriate use of antibiotics in poultry farming and the presence of antibiotic residues in the environment significantly impact the development of resistance among microorganisms present in the production ecosystem. The environment of the henhouse, including chicken manure, creates excellent conditions for the spread of antibiotic-resistant bacteria (ARBs). The presence of ARBs in the litter often leads to the transfer of antibiotic resistance genes (ARGs) through horizontal gene transfer (HGT). Considering the risks associated with the agricultural use of manure, all sanitation treatments applied to poultry litter before its agricultural use should effectively eliminate physicochemical (antibiotic residues, heavy metals) and microbiological (ARBs, ARGs) hazards. This review aims to analyse the current practices in rational manure management, aligned with bio-economy principles, and evaluate their effectiveness in reducing the spread of antibiotic resistance and pathogens in the poultry production ecosystem. This review considered biological, chemical and physical processes for poultry litter treatment applicable in livestock settings, including the use of biopreparations, humic substances, and aluminosilicates during chicken rearing. Post-rearing methods such as the application of organic additives, minerals (calcium compounds), and silver-based nano preparations are also discussed, along with biological and physical methods such as storage, anaerobic digestion, composting and pasteurisation.</jats:p>
dc.description.accesstimeat_publication
dc.description.bibliographyil., bibliogr.
dc.description.financepublication_nocost
dc.description.financecost0,00
dc.description.versionfinal_published
dc.identifier.doi10.2478/aoas-2025-0116
dc.identifier.eissn2300-8733
dc.identifier.issn1642-3402
dc.identifier.urihttps://sciencerep.up.poznan.pl/handle/item/7518
dc.identifier.weblinkhttps://reference-global.com/article/10.2478/aoas-2025-0116
dc.languageen
dc.relation.ispartofAnnals of Animal Science
dc.rightsCC-BY
dc.sciencecloudnosend
dc.share.typeOPEN_JOURNAL
dc.subject.enpoultry litter treatment
dc.subject.enantibiotics
dc.subject.enresistance
dc.subject.enMDR
dc.subject.enHGT
dc.subtypeArticleEarlyAccess
dc.titleEffects of hygiene methods on the microbiome and resistome of poultry litter
dc.typeJournalArticle
dspace.entity.typePublication