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  4. Expression patterns of candidate genes for the Lr46/Yr29 “slow rust” locus in common wheat (Triticum aestivum L.) and associated miRNAs inform of the gene conferring the Puccinia triticina resistance trait
 
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Expression patterns of candidate genes for the Lr46/Yr29 “slow rust” locus in common wheat (Triticum aestivum L.) and associated miRNAs inform of the gene conferring the Puccinia triticina resistance trait

Type
Journal article
Language
English
Date issued
2024
Author
Spychała, Julia
Tomkowiak, Agnieszka 
Noweiska, Aleksandra
Bobrowska, Roksana 
Rychel-Bielska, Sandra
Bocianowski, Jan 
Wolko, Łukasz 
Kowalczewski, Przemysław Łukasz 
Nowicki, Marcin
Kwiatek, Michał Tomasz 
Faculty
Wydział Rolnictwa, Ogrodnictwa i Biotechnologii
Wydział Nauk o Żywności i Żywieniu
Journal
PLoS ONE
ISSN
1932-6203
DOI
10.1371/journal.pone.0309944
Web address
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0309944
Volume
19
Number
9
Pages from-to
e0309944
Abstract (EN)
Leaf rust caused by Puccinia triticina (Pt) is one of the most impactful diseases causing substantial losses in common wheat (Triticum aestivum L.) crops. In adult plants resistant to Pt, a horizontal adult plant resistance (APR) is observed: APR protects the plant against multiple pathogen races and is distinguished by durable persistence under production conditions. The Lr46/Yr29 locus was mapped to chromosome 1B of common wheat genome, but the identity of the underlying gene has not been demonstrated although several candidate genes have been proposed. This study aimed to analyze the expression of nine candidate genes located at the Lr46/Yr29 locus and their four complementary miRNAs (tae-miR5384-3p, tae-miR9780, tae-miR9775, and tae-miR164), in response to Pt infection. The plant materials tested included five reference cultivars in which the molecular marker csLV46G22 associated with the Lr46/Yr29-based Pt resistance was identified, as well as one susceptible control cultivar. Biotic stress was induced in adult plants by inoculation with fungal spores under controlled conditions. Plant material was sampled before and at 6, 12, 24, 48 hours post inoculation (hpi). Differences in expression of candidate genes at the Lr46/Yr29 locus were analyzed by qRT-PCR and showed that the expression of the genes varied at the analyzed time points. The highest expression of Lr46/Yr29 candidate genes (Lr46-Glu1, Lr46-Glu2, Lr46-Glu3, Lr46-RLK1, Lr46-RLK2, Lr46-RLK3, Lr46-RLK4, Lr46-Snex, and Lr46-WRKY) occurred at 12 and 24 hpi and such expression profiles were obtained only for one candidate gene among the nine genes analyzed (Lr46-Glu2), indicating that it may be a contributing factor in the resistance response to Pt infection.
License
cc-bycc-by CC-BY - Attribution
Open access date
September 6, 2024
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